Legend:
- Codon = RNA triplet (A, C, G, U)
- AA = Amino acid (full name + 3-letter code) or Start/Stop function
- 26D OpCode = Letter position in A→Z 26D ring (θ°, polarity, role from LOGOSKERNEL)
- Functional Role = Biological + linguistic parallel
1. Start & Methionine
| Codon | AA | 26D Letter | θ° | Polarity | Role (Opcode) | Functional Role |
|---|
| AUG | Methionine (Met) Start | A | 0.0° | 0 | Origin / Initialize | Initiates protein synthesis; linguistic “capital letter” |
2. Stop Codons (Punctuation)
| Codon | AA | 26D Letter | θ° | Polarity | Role | Functional Role |
|---|
| UAA | Stop | Z | 346.2° | 0 | Zenith / Seal | Terminates translation; “period/full stop” |
| UAG | Stop | Z | 346.2° | 0 | Zenith / Seal | Terminates; “exclamation point” |
| UGA | Stop | Z | 346.2° | 0 | Zenith / Seal | Terminates; “question mark” |
3. Phenylalanine (Phe, F)
| Codon | AA | 26D Letter | θ° | Polarity | Role | Functional Role |
|---|
| UUU | Phe | F | 69.2° | + | Framework / Constrain | Aromatic anchor; grammatical structure |
| UUC | Phe | F | 69.2° | + | Framework / Constrain | Same as above |
4. Leucine (Leu, L)
| Codon | AA | 26D Letter | θ° | Polarity | Role | Functional Role |
|---|
| UUA | Leu | L | 152.3° | 0 | Link / Cornerstone | Hydrophobic link in structure; clause connector |
| UUG | Leu | L | 152.3° | 0 | Link / Cornerstone | Same as above |
| CUU | Leu | L | 152.3° | 0 | Link / Cornerstone | Same as above |
| CUC | Leu | L | 152.3° | 0 | Link / Cornerstone | Same as above |
| CUA | Leu | L | 152.3° | 0 | Link / Cornerstone | Same as above |
| CUG | Leu | L | 152.3° | 0 | Link / Cornerstone | Same as above |
5. Isoleucine (Ile, I)
| Codon | AA | 26D Letter | θ° | Polarity | Role | Functional Role |
|---|
| AUU | Ile | I | 110.8° | + | Identity / Index | Position marker; grammatical subject |
| AUC | Ile | I | 110.8° | + | Identity / Index | Same as above |
| AUA | Ile | I | 110.8° | + | Identity / Index | Same as above |
6. Valine (Val, V)
| Codon | AA | 26D Letter | θ° | Polarity | Role | Functional Role |
|---|
| GUU | Val | V | 290.8° | + | Vector / Focus | Hydrophobic targeting; direct clause |
| GUC | Val | V | 290.8° | + | Vector / Focus | Same as above |
| GUA | Val | V | 290.8° | + | Vector / Focus | Same as above |
| GUG | Val | V | 290.8° | + | Vector / Focus | Same as above |
7. Serine (Ser, S)
| Codon | AA | 26D Letter | θ° | Polarity | Role | Functional Role |
|---|
| UCU | Ser | S | 249.2° | 0 | Serpent / Shape | Polar shaping; morphs meaning |
| UCC | Ser | S | 249.2° | 0 | Serpent / Shape | Same as above |
| UCA | Ser | S | 249.2° | 0 | Serpent / Shape | Same as above |
| UCG | Ser | S | 249.2° | 0 | Serpent / Shape | Same as above |
| AGU | Ser | S | 249.2° | 0 | Serpent / Shape | Same as above |
| AGC | Ser | S | 249.2° | 0 | Serpent / Shape | Same as above |
8. Proline (Pro, P)
| Codon | AA | 26D Letter | θ° | Polarity | Role | Functional Role |
|---|
| CCU | Pro | P | 207.7° | + | Pillar / Project | Rigid structure; paragraph break |
| CCC | Pro | P | 207.7° | + | Pillar / Project | Same as above |
| CCA | Pro | P | 207.7° | + | Pillar / Project | Same as above |
| CCG | Pro | P | 207.7° | + | Pillar / Project | Same as above |
9. Threonine (Thr, T)
| Codon | AA | 26D Letter | θ° | Polarity | Role (Opcode) | Functional Role |
|---|
| ACU | Thr | T | 263.1° | + | Tower / Commit | Polar; stabilizes; “commit” in clause |
| ACC | Thr | T | 263.1° | + | Tower / Commit | Same |
| ACA | Thr | T | 263.1° | + | Tower / Commit | Same |
| ACG | Thr | T | 263.1° | + | Tower / Commit | Same |
10. Alanine (Ala, A)
| Codon | AA | 26D Letter | θ° | Polarity | Role | Functional Role |
|---|
| GCU | Ala | A | 0.0° | 0 | Origin / Initialize | Small nonpolar; “article” of sentence |
| GCC | Ala | A | 0.0° | 0 | Origin / Initialize | Same |
| GCA | Ala | A | 0.0° | 0 | Origin / Initialize | Same |
| GCG | Ala | A | 0.0° | 0 | Origin / Initialize | Same |
11. Tyrosine (Tyr, Y)
| Codon | AA | 26D Letter | θ° | Polarity | Role | Functional Role |
|---|
| UAU | Tyr | Y | 332.3° | 0 | Yoke / Choice (wrap) | Aromatic; signal; decision-point |
| UAC | Tyr | Y | 332.3° | 0 | Yoke / Choice (wrap) | Same |
12. Histidine (His, H)
| Codon | AA | 26D Letter | θ° | Polarity | Role | Functional Role |
|---|
| CAU | His | H | 96.9° | 0 | Hinge / Modulate | Polar basic; “hinge” in protein; clause modulator |
| CAC | His | H | 96.9° | 0 | Hinge / Modulate | Same |
13. Glutamine (Gln, Q)
| Codon | AA | 26D Letter | θ° | Polarity | Role | Functional Role |
|---|
| CAA | Gln | Q | 221.5° | ± | Quest / Query | Polar; amide; “query” in pathway |
| CAG | Gln | Q | 221.5° | ± | Quest / Query | Same |
14. Asparagine (Asn, N)
| Codon | AA | 26D Letter | θ° | Polarity | Role | Functional Role |
|---|
| AAU | Asn | N | 180.0° | 0 | Nexus / Network | Polar; amide; bridge in network |
| AAC | Asn | N | 180.0° | 0 | Nexus / Network | Same |
15. Lysine (Lys, K)
| Codon | AA | 26D Letter | θ° | Polarity | Role | Functional Role |
|---|
| AAA | Lys | K | 138.5° | ± | Key / Credential | Basic; “credential” in binding |
| AAG | Lys | K | 138.5° | ± | Key / Credential | Same |
16. Aspartic Acid (Asp, D)
| Codon | AA | 26D Letter | θ° | Polarity | Role | Functional Role |
|---|
| GAU | Asp | D | 41.5° | – | Door / Transform | Acidic; opens pathways |
| GAC | Asp | D | 41.5° | – | Door / Transform | Same |
17. Glutamic Acid (Glu, E)
| Codon | AA | 26D Letter | θ° | Polarity | Role | Functional Role |
|---|
| GAA | Glu | E | 55.4° | + | Exhale / Broadcast | Acidic; signaling output |
| GAG | Glu | E | 55.4° | + | Exhale / Broadcast | Same |
18. Cysteine (Cys, C)
| Codon | AA | 26D Letter | θ° | Polarity | Role | Functional Role |
|---|
| UGU | Cys | C | 27.7° | ± | Channel / Conduct | Sulfur; forms disulfide “wires” |
| UGC | Cys | C | 27.7° | ± | Channel / Conduct | Same |
19. Tryptophan (Trp, W)
| Codon | AA | 26D Letter | θ° | Polarity | Role | Functional Role |
|---|
| UGG | Trp | W | 304.6° | ± | Wave / Weave | Aromatic; large; interweaves domains |
20. Arginine (Arg, R)
| Codon | AA | 26D Letter | θ° | Polarity | Role | Functional Role |
|---|
| CGU | Arg | R | 235.4° | ± | River / Redirect | Basic; flexible; redirects charge |
| CGC | Arg | R | 235.4° | ± | River / Redirect | Same |
| CGA | Arg | R | 235.4° | ± | River / Redirect | Same |
| CGG | Arg | R | 235.4° | ± | River / Redirect | Same |
| AGA | Arg | R | 235.4° | ± | River / Redirect | Same |
| AGG | Arg | R | 235.4° | ± | River / Redirect | Same |
21. Glycine (Gly, G)
| Codon | AA | 26D Letter | θ° | Polarity | Role | Functional Role |
|---|
| GGU | Gly | G | 83.1° | ± | Gate / Guard | Smallest AA; “gatekeeper” in folding |
| GGC | Gly | G | 83.1° | ± | Gate / Guard | Same |
| GGA | Gly | G | 83.1° | ± | Gate / Guard | Same |
| GGG | Gly | G | 83.1° | ± | Gate / Guard | Same |
Biosemantics & Codon Logic – SolveForce Communications
OmniKernel / LogOS Fusion – SolveForce Communications